BLAST against assembled genome sequences (contigs or scaffolds)

Choose program to use and database to search:

Program Database

Enter sequence below in FASTA format

Or load it from disk

Set subsequence: From         To


The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix    Perform ungapped alignment

Other advanced options:     


Graphical Overview    Alignment view
Descriptions    Alignments Color schema


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